WEKO3
アイテム
{"_buckets": {"deposit": "28061af8-b6f4-4cf2-9bc0-4ee19d88bbd7"}, "_deposit": {"id": "47717", "owners": [], "pid": {"revision_id": 0, "type": "depid", "value": "47717"}, "status": "published"}, "_oai": {"id": "oai:tsukuba.repo.nii.ac.jp:00047717", "sets": ["5925", "6906"]}, "item_5_biblio_info_6": {"attribute_name": "書誌情報", "attribute_value_mlt": [{"bibliographicIssueDates": {"bibliographicIssueDate": "2018-06", "bibliographicIssueDateType": "Issued"}, "bibliographicPageStart": "66", "bibliographicVolumeNumber": "19", "bibliographic_titles": [{"bibliographic_title": "Genome biology"}]}]}, "item_5_creator_3": {"attribute_name": "著者別名", "attribute_type": "creator", "attribute_value_mlt": [{"creatorNames": [{"creatorName": "錦井, 秀和"}], "nameIdentifiers": [{"nameIdentifier": "204630", "nameIdentifierScheme": "WEKO"}, {"nameIdentifier": "30512834", "nameIdentifierScheme": "e-Rad", "nameIdentifierURI": "https://nrid.nii.ac.jp/ja/nrid/1000030512834"}, {"nameIdentifier": "0000001818", "nameIdentifierScheme": "筑波大学研究者総覧", "nameIdentifierURI": "http://trios.tsukuba.ac.jp/researcher/0000001818"}]}]}, "item_5_description_4": {"attribute_name": "抄録", "attribute_value_mlt": [{"subitem_description": "We report a microfluidic system that physically separates nuclear RNA (nucRNA) and cytoplasmic RNA (cytRNA) from a single cell and enables single-cell integrated nucRNA and cytRNA-sequencing (SINC-seq). SINC-seq constructs two individual RNA-seq libraries, nucRNA and cytRNA, per cell, quantifies gene expression in the subcellular compartments, and combines them to create novel single-cell RNA-seq data. Leveraging SINC-seq, we discover distinct natures of correlation among cytRNA and nucRNA that reflect the transient physiological state of single cells. These data provide unique insights into the regulatory network of messenger RNA from the nucleus toward the cytoplasm at the single-cell level.", "subitem_description_type": "Abstract"}]}, "item_5_publisher_27": {"attribute_name": "出版者", "attribute_value_mlt": [{"subitem_publisher": "BioMed Central"}]}, "item_5_relation_10": {"attribute_name": "PubMed番号", "attribute_value_mlt": [{"subitem_relation_type_id": {"subitem_relation_type_id_text": "29871653", "subitem_relation_type_select": "PMID"}}]}, "item_5_relation_11": {"attribute_name": "DOI", "attribute_value_mlt": [{"subitem_relation_type_id": {"subitem_relation_type_id_text": "10.1186/s13059-018-1446-9", "subitem_relation_type_select": "DOI"}}]}, "item_5_rights_12": {"attribute_name": "権利", "attribute_value_mlt": [{"subitem_rights": "© The Author(s). 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated."}]}, "item_5_select_15": {"attribute_name": "著者版フラグ", "attribute_value_mlt": [{"subitem_select_item": "publisher"}]}, "item_5_source_id_7": {"attribute_name": "ISSN", "attribute_value_mlt": [{"subitem_source_identifier": "1474-760X", "subitem_source_identifier_type": "ISSN"}]}, "item_5_source_id_9": {"attribute_name": "書誌レコードID", "attribute_value_mlt": [{"subitem_source_identifier": "AA12050817", "subitem_source_identifier_type": "NCID"}]}, "item_creator": {"attribute_name": "著者", "attribute_type": "creator", "attribute_value_mlt": [{"creatorNames": [{"creatorName": "Abdelmoez, Mahmoud N."}], "nameIdentifiers": [{"nameIdentifier": "196372", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Iida, Kei"}], "nameIdentifiers": [{"nameIdentifier": "196373", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Oguchi, Yusuke"}], "nameIdentifiers": [{"nameIdentifier": "196374", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Nishikii, Hidekazu"}], "nameIdentifiers": [{"nameIdentifier": "196375", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Yokokawa, Ryuji"}], "nameIdentifiers": [{"nameIdentifier": "196376", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Kotera, Hidetoshi"}], "nameIdentifiers": [{"nameIdentifier": "196377", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Uemura, Sotaro"}], "nameIdentifiers": [{"nameIdentifier": "196378", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Santiago, Juan G."}], "nameIdentifiers": [{"nameIdentifier": "196379", "nameIdentifierScheme": "WEKO"}]}, {"creatorNames": [{"creatorName": "Shintaku, Hirofumi"}], "nameIdentifiers": [{"nameIdentifier": "196380", "nameIdentifierScheme": "WEKO"}]}]}, "item_files": {"attribute_name": "ファイル情報", "attribute_type": "file", "attribute_value_mlt": [{"accessrole": "open_date", "date": [{"dateType": "Available", "dateValue": "2018-08-21"}], "displaytype": "detail", "download_preview_message": "", "file_order": 0, "filename": "GB_19-66.pdf", "filesize": [{"value": "5.5 MB"}], "format": "application/pdf", "future_date_message": "", "is_thumbnail": false, "licensetype": "license_6", "mimetype": "application/pdf", "size": 5500000.0, "url": {"label": "GB_19-66", "url": "https://tsukuba.repo.nii.ac.jp/record/47717/files/GB_19-66.pdf"}, "version_id": "ef8f570f-136e-4cf7-8011-c669cc04fb53"}]}, "item_language": {"attribute_name": "言語", "attribute_value_mlt": [{"subitem_language": "eng"}]}, "item_resource_type": {"attribute_name": "資源タイプ", "attribute_value_mlt": [{"resourcetype": "journal article", "resourceuri": "http://purl.org/coar/resource_type/c_6501"}]}, "item_title": "SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology", "item_titles": {"attribute_name": "タイトル", "attribute_value_mlt": [{"subitem_title": "SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology"}]}, "item_type_id": "5", "owner": "1", "path": ["5925", "6906"], "permalink_uri": "http://hdl.handle.net/2241/00153083", "pubdate": {"attribute_name": "公開日", "attribute_value": "2018-08-21"}, "publish_date": "2018-08-21", "publish_status": "0", "recid": "47717", "relation": {}, "relation_version_is_last": true, "title": ["SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology"], "weko_shared_id": 5}
SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology
http://hdl.handle.net/2241/00153083
http://hdl.handle.net/2241/00153083e17540ee-a2c8-4f8b-9c1a-b01134c3ce14
名前 / ファイル | ライセンス | アクション |
---|---|---|
GB_19-66 (5.5 MB)
|
Item type | Journal Article(1) | |||||
---|---|---|---|---|---|---|
公開日 | 2018-08-21 | |||||
タイトル | ||||||
タイトル | SINC-seq: correlation of transient gene expressions between nucleus and cytoplasm reflects single-cell physiology | |||||
言語 | ||||||
言語 | eng | |||||
資源タイプ | ||||||
資源 | http://purl.org/coar/resource_type/c_6501 | |||||
タイプ | journal article | |||||
著者 |
Abdelmoez, Mahmoud N.
× Abdelmoez, Mahmoud N.× Iida, Kei× Oguchi, Yusuke× Nishikii, Hidekazu× Yokokawa, Ryuji× Kotera, Hidetoshi× Uemura, Sotaro× Santiago, Juan G.× Shintaku, Hirofumi |
|||||
著者別名 |
錦井, 秀和
× 錦井, 秀和 |
|||||
抄録 | ||||||
内容記述タイプ | Abstract | |||||
内容記述 | We report a microfluidic system that physically separates nuclear RNA (nucRNA) and cytoplasmic RNA (cytRNA) from a single cell and enables single-cell integrated nucRNA and cytRNA-sequencing (SINC-seq). SINC-seq constructs two individual RNA-seq libraries, nucRNA and cytRNA, per cell, quantifies gene expression in the subcellular compartments, and combines them to create novel single-cell RNA-seq data. Leveraging SINC-seq, we discover distinct natures of correlation among cytRNA and nucRNA that reflect the transient physiological state of single cells. These data provide unique insights into the regulatory network of messenger RNA from the nucleus toward the cytoplasm at the single-cell level. | |||||
書誌情報 |
Genome biology 巻 19, p. 66, 発行日 2018-06 |
|||||
ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 1474-760X | |||||
書誌レコードID | ||||||
収録物識別子タイプ | NCID | |||||
収録物識別子 | AA12050817 | |||||
PubMed番号 | ||||||
識別子タイプ | PMID | |||||
関連識別子 | 29871653 | |||||
DOI | ||||||
識別子タイプ | DOI | |||||
関連識別子 | 10.1186/s13059-018-1446-9 | |||||
権利 | ||||||
権利情報 | © The Author(s). 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. | |||||
著者版フラグ | ||||||
値 | publisher | |||||
出版者 | ||||||
出版者 | BioMed Central |