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Hidden genetic history of the Japanese sand dollar Peronella (Echinoidea: Laganidae) revealed by nuclear intron sequences
http://hdl.handle.net/2241/00153031
http://hdl.handle.net/2241/00153031d63372c4-60e2-4376-914c-df7d52837811
名前 / ファイル | ライセンス | アクション |
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Gene_659 (850.8 kB)
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Item type | Journal Article(1) | |||||
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公開日 | 2018-08-06 | |||||
タイトル | ||||||
タイトル | Hidden genetic history of the Japanese sand dollar Peronella (Echinoidea: Laganidae) revealed by nuclear intron sequences | |||||
言語 | ||||||
言語 | eng | |||||
資源タイプ | ||||||
資源 | http://purl.org/coar/resource_type/c_6501 | |||||
タイプ | journal article | |||||
著者 |
Endo, Megumi
× Endo, Megumi× Hirose, Mamiko× Honda, Masanao× Koga, Hiroyuki× Morino, Yoshiaki× Kiyomoto, Masato× Wada, Hiroshi |
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著者別名 |
本多, 正尚
× 本多, 正尚× 守野, 孔明× 和田, 洋 |
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抄録 | ||||||
内容記述タイプ | Abstract | |||||
内容記述 | The marine environment around Japan experienced significant changes during the Cenozoic Era. In this study, we report findings suggesting that this dynamic history left behind traces in the genome of the Japanese sand dollar species Peronella japonica and P. rubra. Although mitochondrial Cytochrome C Oxidase I sequences did not indicate fragmentation of the current local populations of P. japonica around Japan, two different types of intron sequence were found in the Alx1 locus. We inferred that past fragmentation of the populations account for the presence of two types of nuclear sequences as alleles in the Alx1 intron of P. japonica. It is likely that the split populations have intermixed in recent times; hence, we did not detect polymorphisms in the sequences reflecting the current localization of the species. In addition, we found two allelic sequences of theAlx1 intron in the sister species P. rubra. The divergence times of the two types of Alx1 intron sequences were estimated at approximately 14.9 and 4.0 million years ago for P. japonica and P. rubra, respectively. Our study indicates that information from the intron sequences of nuclear genes can enhance our understanding of past genetic events in organisms. | |||||
書誌情報 |
Gene 巻 659, p. 37-43, 発行日 2018-06 |
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ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 0378-1119 | |||||
書誌レコードID | ||||||
収録物識別子タイプ | NCID | |||||
収録物識別子 | AA00654385 | |||||
PubMed番号 | ||||||
識別子タイプ | PMID | |||||
関連識別子 | 29548859 | |||||
DOI | ||||||
識別子タイプ | DOI | |||||
関連識別子 | 10.1016/j.gene.2018.03.034 | |||||
権利 | ||||||
権利情報 | © 2018. This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/ | |||||
著者版フラグ | ||||||
値 | author | |||||
出版者 | ||||||
出版者 | Elsevier |