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Genome sequence and overview of Oligoflexus tunisiensis Shr3T in the eighth class Oligoflexia of the phylum Proteobacteria
http://hdl.handle.net/2241/00145517
http://hdl.handle.net/2241/00145517ddca8318-5b91-4ff3-823b-89cc4caff96a
名前 / ファイル | ライセンス | アクション |
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SGS_11 (1.9 MB)
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Item type | Journal Article(1) | |||||
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公開日 | 2017-03-13 | |||||
タイトル | ||||||
タイトル | Genome sequence and overview of Oligoflexus tunisiensis Shr3T in the eighth class Oligoflexia of the phylum Proteobacteria | |||||
言語 | ||||||
言語 | eng | |||||
資源タイプ | ||||||
資源 | http://purl.org/coar/resource_type/c_6501 | |||||
タイプ | journal article | |||||
著者 |
Nakai, Ryosuke
× Nakai, Ryosuke× Fujisawa, Takatomo× Nakamura, Yasukazu× Baba, Tomoya× Nishijima, Miyuki× Karray, Fatma× Sayadi, Sami× Isoda, Hiroko× Naganuma, Takeshi× Niki, Hironori |
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著者別名 |
礒田, 博子
× 礒田, 博子 |
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抄録 | ||||||
内容記述タイプ | Abstract | |||||
内容記述 | Oligoflexus tunisiensis Shr3T is the first strain described in the newest (eighth) class Oligoflexia of the phylum Proteobacteria. This strain was isolated from the 0.2-μm filtrate of a suspension of sand gravels collected in the Sahara Desert in the Republic of Tunisia. The genome of O. tunisiensis Shr3T is 7,569,109 bp long and consists of one scaffold with a 54.3% G + C content. A total of 6,463 genes were predicted, comprising 6,406 protein-coding and 57 RNA genes. Genome sequence analysis suggested that strain Shr3T had multiple terminal oxidases for aerobic respiration and various transporters, including the resistance-nodulation-cell division-type efflux pumps. Additionally, gene sequences related to the incomplete denitrification pathway lacking the final step to reduce nitrous oxide (N2O) to nitrogen gas (N2) were found in the O. tunisiensis Shr3T genome. The results presented herein provide insight into the metabolic versatility and N2O-producing activity of Oligoflexus species. | |||||
書誌情報 |
Standards in genomic sciences 巻 11, 号 1, p. 90, 発行日 2016-12 |
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ISSN | ||||||
収録物識別子タイプ | ISSN | |||||
収録物識別子 | 1944-3277 | |||||
PubMed番号 | ||||||
識別子タイプ | PMID | |||||
関連識別子 | 27999625 | |||||
DOI | ||||||
識別子タイプ | DOI | |||||
関連識別子 | 10.1186/s40793-016-0210-6 | |||||
権利 | ||||||
権利情報 | © The Author(s).2016 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. | |||||
著者版フラグ | ||||||
値 | publisher | |||||
出版者 | ||||||
出版者 | BioMed Central |